The detailed information of tRNA gene sequence


Sequence ID>WENV170305936
Genome IDCESI01291838
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1026
End posion on genome 954
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatatactag
tRNA gene sequence 
TAGCTTGTAGTTTAATGGTTAAAACGTAATATTCATAATTTTATTAGTGTAGGTTCAAAT
CCTGCCAAGCTAAttt
Downstream region at tRNA end position 
tttcgatact
Secondary structure (Cloverleaf model)
>WENV170305936	Met	CAT
                   g      Attt tttcgatact
                     T - A
                     A - T
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | + | | |     A
    G       T T T G       G T A G G     C
    G       | | | |                 T T
    T       A A A C
      T A          G     TTAGT
                    T - A
                    A - T
                    A - T
                    T   T
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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