The detailed information of tRNA gene sequence


Sequence ID>WENV170305979
Genome IDCESI01299775
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 20
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcaggtctcc
tRNA gene sequence
AATGAGATAGTTCAGTTTGGTAGAACCTCGGACTCATAAATCGATGGTCGGGGGTTCGAA
TCCCCCTCTCATTAgcg
Downstream region at tRNA end position
accaagcaaa
Secondary structure (Cloverleaf model)
>WENV170305979	Met	CAT
                   c      Agcg accaagcaaa
                     A - T
                     A - T
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C T T G       G G G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        C     TGGTC
                    T - A
                    C - G
                    G - C
                    G + T
                    A   A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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