The detailed information of tRNA gene sequence


Sequence ID>WENV170307862
Genome IDCESK01017867
Search identical group
Phylum/Class[CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3088
End posion on genome 3164
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaagattgg
tRNA gene sequence 
GGCGGAGTAGCTCAGGTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
ttggatcgga
Secondary structure (Cloverleaf model)
>WENV170307862	Met	CAT
                   g      ACCA ttggatcgga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      G G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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