The detailed information of tRNA gene sequence


Sequence ID>WENV170312598
Genome IDCESM01340270
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 226
End posion on genome 301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataataatct
tRNA gene sequence 
GGCGAATTAGCTCAGTGGTTAGAGCAGCGGAATCATAATCCGAAGGTCCTAGGTTCAAAT
CCCAGATTCGCCACCA
Downstream region at tRNA end position 
tttttcattt
Secondary structure (Cloverleaf model)
>WENV170312598	Met	CAT
                   t      ACCA tttttcattt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     G A C C C     A
      T G A        A      | |   | |     A
    G       C T C G       C T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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