The detailed information of tRNA gene sequence


Sequence ID>WENV170323154
Genome IDCESR01287490
Search identical group
Phylum/Class[CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 187
End posion on genome 262
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ctaaaaatat
tRNA gene sequence
AGCGGATTGGAGCAGTGGTCAGCTCGCAAGGCTCATAACCTTGAGGTCGGTAGTTCGAAT
CTACCATCCGCAACTA
Downstream region at tRNA end position
aattaataac
Secondary structure (Cloverleaf model)
>WENV170323154	Met	CAT
                   t      ACTA aattaataac
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C C A T C     A
      T G A        G      | | | | |     G
    G       C G A G       G G T A G     C
    G       | | | |                 T T
    T       G C T C
      C A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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