The detailed information of tRNA gene sequence


Sequence ID>WENV170325464
Genome IDCEST01021521
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1040
End posion on genome 1114
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cacactatcc
tRNA gene sequence 
CTAAAGTTTAGTTTAATGGTTAAAACATTGAATTTCAAATTCAAGAATTAAAGGTTCGAT
TCCCTTAACTTTTGGttc
Downstream region at tRNA end position 
tctttttttt
Secondary structure (Cloverleaf model)
>WENV170325464	SeC	TCA
                   c      Gttc tctttttttt
                     C - G
                     T   T
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A
                     T - A          T T
                    T     T T C C C     A
      T A A        A      | |   | |     G
    G       T T T G       A A A G G     C
    G       | | | |                 T T
    T       A A A C
      T A          A     GAATT
                    T - A
                    T - A
                    G - C
                    A - T
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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