The detailed information of tRNA gene sequence


Sequence ID>WENV170325574
Genome IDCEST01032818
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 20752
End posion on genome 20679
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atataacttT
tRNA gene sequence 
AGGCTTATAGTTCAGCGGTAGAGCGTACCGCTCATAACGGTTTCGTCGTAGGTTCAAATC
CTACTAAGCCTATtt
Downstream region at tRNA end position 
attattattt
Secondary structure (Cloverleaf model)
>WENV170325574	Met	CAT
                   T      ATtt attattattt
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     C A T C C     A
        G A        A      | | | | |     A
      C     C T T G       G T A G G     C
      G     | | + |                 T T
      G     G A G C
        T A        G     TCGTC
                    T   T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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