The detailed information of tRNA gene sequence


Sequence ID>WENV170325657
Genome IDCEST01038483
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2644
End posion on genome 2558
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatgtttatT
tRNA gene sequence 
TTTCGTGTGGCCGAGTGGATTATGGCAATAGATTGCTAATCTATCAAATCTAATGATTTC
GTAGGTTCGAATCCTATCACTTAAATtt
Downstream region at tRNA end position 
atttttgtat
Secondary structure (Cloverleaf model)
>WENV170325657	Ser	GCT
                   T      ATtt atttttgtat
                     T - A
                     T - A
                     T   T
                     C   T
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T A G G     C
    G       + | | |                 T T
    A       T G G C
      T T A        A     CAAATCTAATGATTTC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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