The detailed information of tRNA gene sequence


Sequence ID>WENV170326111
Genome IDCEST01094878
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 313
End posion on genome 240
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gatctttaaa
tRNA gene sequence
AAGGATATAGTTTAGTTTGGTAGAACATCGGTTTTGGGAATCGAAGGTCGTAAGTTCAAA
TCTTACTATCCTGAtga
Downstream region at tRNA end position
atattataat
Secondary structure (Cloverleaf model)
>WENV170326111	Pro	TGG
                   a      Atga atattataat
                     A   G
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C A T T C     A
      T G A        A      | | | | |     A
    T       T T T G       G T A A G     C
    T       + | | |                 T T
    G       G A A C
      G T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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