The detailed information of tRNA gene sequence


Sequence ID>WENV170326138
Genome IDCEST01116287
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 405
End posion on genome 322
Amino Acid Sup
Anticodon TTA
Upstream region at tRNA start position
tatttttagT
tRNA gene sequence
GGGCAAATGGCCGAGTGGTTAAAAGCGGATGCCTTTAAAGCATCTTCGTAACAGATCGTA
GGTTCGAATCCTTCTTTGCCCAAaa
Downstream region at tRNA end position
attaaaatcc
Secondary structure (Cloverleaf model)
>WENV170326138	Sup	TTA
                   T      AAaa attaaaatcc
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     A - T          T A
                    T     C T T C C     A
      T G A        G      |   | | |     G
    G       G C C G       G T A G G     C
    G           | |                 T T
    T       A A G C
      T A A        G     TTCGTAACAGATC
                    G - C
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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