The detailed information of tRNA gene sequence


Sequence ID>WENV170326262
Genome IDCEST01164691
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 447
End posion on genome 372
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
acgcttatct
tRNA gene sequence
ACGGGTGTGGCTCAGCTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGTTCGATC
CCTACCACCCGTGCAA
Downstream region at tRNA end position
gtaaaaagaa
Secondary structure (Cloverleaf model)
>WENV170326262	Trp	CCA
                   t      GCAA gtaaaaagaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     C A T C C     A
      C G A        G      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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