The detailed information of tRNA gene sequence


Sequence ID>WENV170326397
Genome IDCEST01180489
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 11793
End posion on genome 11722
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agttaatcag
tRNA gene sequence 
TAGAATTTAGTTTAGCGGCAAAACATTAAGTTTCAAACTTAAAAGGCAAGGGTTCGATTC
CTTTAATTCTCGgcg
Downstream region at tRNA end position 
tataactcaa
Secondary structure (Cloverleaf model)
>WENV170326397	SeC	TCA
                   g      Ggcg tataactcaa
                     T   C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A
                     T - A          T T
                    T     T T T C C     A
        G A        A      | | + | |     G
      C     T T T G       A A G G G     C
      G     | | | |                 T T
      G     A A A C
        C A        A     AAGGC
                    T - A
                    T - A
                    A - T
                    A - T
                    G - C
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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