The detailed information of tRNA gene sequence


Sequence ID>WENV170327439
Genome IDCESU01079089
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 397
End posion on genome 469
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tattaaaaaa
tRNA gene sequence 
AGGAGTTTAGTTTAATTGGTAAAACCTGAAATTTCAAATTTCATAATTATGGGTTCAAAT
CCTTTAACTCTTGatt
Downstream region at tRNA end position 
cgcttttaac
Secondary structure (Cloverleaf model)
>WENV170327439	SeC	TCA
                   a      Gatt cgcttttaac
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          T A
                    T     T T T C C     A
      T A A        A      |   + | |     A
    T       T T T G       A T G G G     C
    G       | | | |                 T T
    G       A A A C
      T A          C     TAATT
                    T - A
                    G - C
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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