The detailed information of tRNA gene sequence


Sequence ID>WENV170327547
Genome IDCESU01091533
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 963
End posion on genome 1036
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ccctcgattt
tRNA gene sequence
GCGCTTGTAGCTCAGTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGTAGGTTCAAAT
CCTACCAGGCGCACtg
Downstream region at tRNA end position
acgagacgcc
Secondary structure (Cloverleaf model)
>WENV170327547	Met	CAT
                   t      ACtg acgagacgcc
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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