The detailed information of tRNA gene sequence


Sequence ID>WENV170327827
Genome IDCESU01106961
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 539
End posion on genome 464
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
agttgtaaaT
tRNA gene sequence
ACCAATATAGCATAATTAGGTCAGTGCATTGAATTCATAATTCAACCGTAATGGTTCAAA
TCCATTTTTTGGTAAat
Downstream region at tRNA end position
ttccttgttt
Secondary structure (Cloverleaf model)
>WENV170327827	Met	CAT
                   T      AAat ttccttgttt
                     A - T
                     C - G
                     C - G
                     A - T
                     A - T
                     T   T
                     A - T          T A
                    T     T T A C C     A
    T T A A        A      | | | | |     A
  A         T A C G       A A T G G     C
  G         + | | |                 T T
  G         G T G C
    T C A          A     CCGT
                    T - A
                    T - A
                    G - C
                    A - T
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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