The detailed information of tRNA gene sequence


Sequence ID>WENV170327921
Genome IDCESU01134499
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 402
End posion on genome 330
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccataaaa
tRNA gene sequence 
AGCGATGTAACTCAATTGGTAGAGTAGCGGAATCATAATCCGTATGTTGTGGGTTCAAGT
CCCACTTTCGTTAttt
Downstream region at tRNA end position 
tttatcggaa
Secondary structure (Cloverleaf model)
>WENV170327921	Met	CAT
                   a      Attt tttatcggaa
                     A - T
                     G + T
                     C - G
                     G - C
                     A - T
                     T   T
                     G + T          T G
                    T     C A C C C     A
      T A A        A      | | | | |     A
    T       C T C A       G T G G G     C
    G       | | | |                 T T
    G       G A G T
      T A          A     ATGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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