The detailed information of tRNA gene sequence


Sequence ID>WENV170327935
Genome IDCESU01142848
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 541
End posion on genome 469
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
cgctaactca
tRNA gene sequence
TCGTTTTTAGCTTAAATGGAAAAAGCGTTAAATTTCTAATTTAGATAAGTTGGTTCGAAT
CCAGCAAAACGAAgct
Downstream region at tRNA end position
attctctttt
Secondary structure (Cloverleaf model)
>WENV170327935	Arg	TCT
                   a      Agct attctctttt
                     T - A
                     C - G
                     G - C
                     T - A
                     T - A
                     T - A
                     T - A          T A
                    T     C G A C C     A
      A A A        A      | + | | |     G
    T       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      A A A        G     ATAA
                    T + G
                    T - A
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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