The detailed information of tRNA gene sequence


Sequence ID>WENV170328073
Genome IDCESU01190154
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 296
End posion on genome 222
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattaaaac
tRNA gene sequence 
TGGCGTAAAGTTTAATTGGTTGAAACATAATATTCATAATATTAAAATAATTGGTTCGAA
TCCAGTTATGCCAACtc
Downstream region at tRNA end position 
cactgaattt
Secondary structure (Cloverleaf model)
>WENV170328073	Met	CAT
                   c      ACtc cactgaattt
                     T - A
                     G - C
                     G - C
                     C - G
                     G + T
                     T - A
                     A - T          T A
                    A     T G A C C     A
      T A A        A      | + | | |     G
    T       T T T G       A T T G G     C
    G       | | | |                 T T
    G       A A A C
      T T G        A     AAATA
                    T - A
                    A - T
                    A - T
                    T - A
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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