The detailed information of tRNA gene sequence


Sequence ID>WENV170330140
Genome IDCESV01188878
Search identical group
Phylum/Class[CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 245
End posion on genome 169
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
tatgatattt
tRNA gene sequence
CGGGCCATAGCGCAGCCTGGTAGCGCGTCCGTCTGGGGGACGGGAGGTCACAGGTTCGAA
TCCTGTTGGCCCGACCA
Downstream region at tRNA end position
ttataaatta
Secondary structure (Cloverleaf model)
>WENV170330140	Pro	GGG
                   t      ACCA ttataaatta
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    C       C G C G       A C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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