The detailed information of tRNA gene sequence


Sequence ID>WENV170331833
Genome IDCESW01098581
Search identical group
Phylum/Class[CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 258
End posion on genome 177
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tgggatattg
tRNA gene sequence
GATGTCATGGCCGAGTGGTTAAGGTGATGGACTGCTAATCCATTGGGCTCTGCCCGCGTA
GGTTCGAATCCTGCTGATGTCGatt
Downstream region at tRNA end position
ttttgctaca
Secondary structure (Cloverleaf model)
>WENV170331833	Ser	GCT
                   g      Gatt ttttgctaca
                     G - C
                     A - T
                     T + G
                     G + T
                     T - A
                     C - G
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | + | | |     G
    G       G C C G       G T A G G     C
    G         | | +                 T T
    T       A G G T
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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