The detailed information of tRNA gene sequence


Sequence ID>WENV170332300
Genome IDCESW01145812
Search identical group
Phylum/Class[CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 507
End posion on genome 596
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgacgccttt
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTTGAAAGGGCTCGCCTGGAAAGCGAGTATATGGGCAACCGTA
TCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaccattt
Secondary structure (Cloverleaf model)
>WENV170332300	Ser	GGA
                   t      GCCA tttaccattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G G G G G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TATATGGGCAACCGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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