The detailed information of tRNA gene sequence


Sequence ID>WENV170333027
Genome IDCESX01117765
Search identical group
Phylum/Class[CESX] marine metagenome genome assembly TARA_109_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 413
End posion on genome 488
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagatttaa
tRNA gene sequence 
TGCGGGATGGAGGAGTTGGTACCTTGCTTGGCTCATAACCAAGAGATCGGCAGTTCGAAT
CTGTCTCCCGCAACTA
Downstream region at tRNA end position 
tgtagtaaag
Secondary structure (Cloverleaf model)
>WENV170333027	Met	CAT
                   a      ACTA tgtagtaaag
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T G T C     A
      T G A        G      | + | | |     G
    T       G G A G       G G C A G     C
    G       | | | +                 T T
    G       C C T T
      T A          G     AGATC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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