The detailed information of tRNA gene sequence


Sequence ID>WENV170334554
Genome IDCESY01251382
Search identical group
Phylum/Class[CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 154
End posion on genome 60
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccgttagcaa
tRNA gene sequence 
TGGGGGAGAATAGGGTCCGGTGGCTCTACTGGTCTTCAAAACCAGCTTGTCTACGCGAGT
AGATAGGTGGGTTCGACTCCCACCCTCTCCCGCCAt
Downstream region at tRNA end position 
tttcttttca
Secondary structure (Cloverleaf model)
>WENV170334554	SeC(p)	TCA
                   a      CCAt tttcttttca
                     T + G
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T          C C
                    G     C C C A C     T
    C T G G        A      | | | |       C
  C         G A T A       G G G T T     A
  G         | |   |                 C G
  G         C T C T
    T G G          A     CTTGTCTACGCGAGTAGATAGGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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