The detailed information of tRNA gene sequence


Sequence ID>WENV170336323
Genome IDCETA01004610
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1713
End posion on genome 1794
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position
ctgtaaccaa
tRNA gene sequence
GACACCATGGCCGAGTGGTTAAGGCGTTAGATTAGAAATCTAATGGGCTCTGCCCGCGTG
AGTTCGAATCTCACTGGTGTCGatt
Downstream region at tRNA end position
ttttgacttt
Secondary structure (Cloverleaf model)
>WENV170336323	Ser	AGA
                   a      Gatt ttttgacttt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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