The detailed information of tRNA gene sequence


Sequence ID>WENV170336436
Genome IDCETA01011728
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 468
End posion on genome 379
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaattttttt
tRNA gene sequence 
GGAGGGATCGCATAGTCTGGCCTAGTGCGCACGCTTGGAAAGCGTGTAAGGGTTTATCCC
CTTCGAGGGTTCGAATCCCTCTCCCTCCGCag
Downstream region at tRNA end position 
agaattttta
Secondary structure (Cloverleaf model)
>WENV170336436	Ser	GGA
                   t      GCag agaattttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TAAGGGTTTATCCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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