The detailed information of tRNA gene sequence


Sequence ID>WENV170337307
Genome IDCETA01097691
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 249
End posion on genome 172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttaattta
tRNA gene sequence 
GGGCCCTTAGCTCAGTTTGGTTAGAGCGCTCCGCTCATAACGGAGTGGTCCGGGGTTCAA
ATCCCTGAGGGCCCACCA
Downstream region at tRNA end position 
gtatttcaat
Secondary structure (Cloverleaf model)
>WENV170337307	Met	CAT
                   a      ACCA gtatttcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
    T T G A        A      | + | | |     A
  T         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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