The detailed information of tRNA gene sequence


Sequence ID>WENV170337321
Genome IDCETA01098818
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 190
End posion on genome 282
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tataaaaaga
tRNA gene sequence
GGTGAGGTGGCAGAGAGGCTGAATGCGGCGGGTTGCTAACTCGTTATACAACCTTGTGTT
GTATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position
ttttatgatt
Secondary structure (Cloverleaf model)
>WENV170337321	Ser	GCT
                   a      GCCA ttttatgatt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        G     TATACAACCTTGTGTTGTATC
                    G + T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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