The detailed information of tRNA gene sequence


Sequence ID>WENV170337431
Genome IDCETA01111956
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1921
End posion on genome 1831
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaagaattt
tRNA gene sequence 
GGAGAGTTGGCAGAGTTGGTCTATTGCGCTCGACTGCTAATCGAGAGTCCTATTACAGGG
CACACAGGTTCGAATCCTGTACTCTCCGCCA
Downstream region at tRNA end position 
gaattattaa
Secondary structure (Cloverleaf model)
>WENV170337431	Ser	GCT
                   t      GCCA gaattattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
    T T G A        G      | | | | |     G
  G         G A C G       A C A G G     C
  G         + | | |                 T T
  T         T T G C
    C T A          G     AGTCCTATTACAGGGCAC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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