The detailed information of tRNA gene sequence


Sequence ID>WENV170337947
Genome IDCETA01224142
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 123
End posion on genome 196
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gtatccagtc
tRNA gene sequence
GGGCCTGTAGCTCAGTGGTTAGAGCAGGGGACTCATAATCCCTTGGCCGTGGGTTCGATC
CCCACCAGGCCCACat
Downstream region at tRNA end position
atcagaagaa
Secondary structure (Cloverleaf model)
>WENV170337947	Met	CAT
                   c      ACat atcagaagaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGCC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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