The detailed information of tRNA gene sequence


Sequence ID>WENV170338070
Genome IDCETB01001573
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 78
End posion on genome 152
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aggcgtatta
tRNA gene sequence 
GGCGTCGTACCCAAGCGGTAAGGGAGCGGTCTGCAAAACCGTCATGCACCAGTTCGAATC
TGGTCGACGCCTCTA
Downstream region at tRNA end position 
cagtttttat
Secondary structure (Cloverleaf model)
>WENV170338070	Cys	GCA
                   a      TCTA cagtttttat
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T G G T C     A
        G A        A      | | | | |     G
      C     A C C C       A C C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     CATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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