The detailed information of tRNA gene sequence


Sequence ID>WENV170338616
Genome IDCETB01046301
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 57
End posion on genome 132
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataaatagT
tRNA gene sequence 
TGCATTGTAGAGCAATGGTTATGTTCATCTGTTTCATCAGCAGAAAATAAGTGGTTCAAA
TCCATTCAATGCAATat
Downstream region at tRNA end position 
ttttggatat
Secondary structure (Cloverleaf model)
>WENV170338616	Met	CAT
                   T      ATat ttttggatat
                     T - A
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A
                     G - C          T A
                    T     T T A C C     A
      T A A        A      | + | | |     A
    G       C G A G       A G T G G     C
    G       | + | |                 T T
    T       G T T C
      T A T        A     AAATA
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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