The detailed information of tRNA gene sequence


Sequence ID>WENV170339658
Genome IDCETB01149132
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 478
End posion on genome 555
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gagggctcaa
tRNA gene sequence
GGCGGCGTAGCTCAGTCTGGTTAGAGCGCTCGACTCATAATCGAGAGGTCGGAAGTTCAA
GTCTTCCCGTCGCTACTA
Downstream region at tRNA end position
cagagataaa
Secondary structure (Cloverleaf model)
>WENV170339658	Met	CAT
                   a      ACTA cagagataaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     C C T T C     A
    C T G A        A      | | | | |     A
  T         C T C G       G G A A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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