The detailed information of tRNA gene sequence


Sequence ID>WENV170340953
Genome IDCETC01056002
Search identical group
Phylum/Class[CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 539
End posion on genome 466
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gattaggatT
tRNA gene sequence 
GGCTCATTAGTATAATGGTTAGTATCGGTGTCTGTCTAACACCTGGAAGCAGTTCGAGTC
TGCTATGAGCCGTta
Downstream region at tRNA end position 
gtgaagccgt
Secondary structure (Cloverleaf model)
>WENV170340953	Asp	GTC
                   T      GTta gtgaagccgt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A          T G
                    T     T C G T C     A
      T A A        A      | | | | |     G
    G       T A T G       A G C A G     C
    G       + | | +                 T T
    T       G T A T
      T A          C     TGGA
                    G - C
                    G - C
                    T - A
                    G - C
                    T - A
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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