The detailed information of tRNA gene sequence


Sequence ID>WENV170341102
Genome IDCETC01069607
Search identical group
Phylum/Class[CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3649
End posion on genome 3725
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actttacatt
tRNA gene sequence 
GTATCGGTGGCTGAATGGATTTAGGCACAGGATTGCAAATCCTGACTATGCGGGTTCGAG
TCCCGCCCGATATTCCA
Downstream region at tRNA end position 
aatttaagga
Secondary structure (Cloverleaf model)
>WENV170341102	Cys	GCA
                   t      TCCA aatttaagga
                     G + T
                     T - A
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         + | |                 T T
    A       A G G C
      T T T        A     ACTAT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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