The detailed information of tRNA gene sequence


Sequence ID>WENV170342378
Genome IDCETD01115051
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 74
End posion on genome 1
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position
cacacccaat
tRNA gene sequence
GGGATGTTAGCTCAGTTGGTAGAGCGTGCGCTTAGCATGTGCAAGGTCAGGAGTTCGACT
CTTCTACATTCCACnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170342378	Ala	AGC
                   t      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     G - C
                     T - A          T C
                    T     T C T T C     A
      T G A        A      | | + | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    G - C
                    C - G
                    G + T
                    C - G
                  T       T
                  T       A
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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