The detailed information of tRNA gene sequence


Sequence ID>WENV170343116
Genome IDCETD01303830
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 332
End posion on genome 406
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attaatcaat
tRNA gene sequence 
AGGGGTAAAGTGTCAATGGTTGCACGTCAGACTCCAAATCTGAAAGACAGGGTTCGATTC
CTTGTGCCTCTGCCA
Downstream region at tRNA end position 
attaattgat
Secondary structure (Cloverleaf model)
>WENV170343116	Trp	CCA
                   t      GCCA attaattgat
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    A     G T T C C     A
      A A C        A      | | + | |     G
    T       T G T G       C A G G G     C
    G       + | | |                 T T
    G       G C A C
      T T          G     AAGA
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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