The detailed information of tRNA gene sequence


Sequence ID>WENV170344252
Genome IDCETE01082730
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 155
End posion on genome 232
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggttcattt
tRNA gene sequence 
AACGAGGTGGGGTAGTCTGGATATCCCGTCGGGCTCATAACCCGGAGATCGATGGTTCAA
ATCCATCCCTCGTTACCA
Downstream region at tRNA end position 
tcaactatat
Secondary structure (Cloverleaf model)
>WENV170344252	Met	CAT
                   t      ACCA tcaactatat
                     A - T
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  T         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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