The detailed information of tRNA gene sequence


Sequence ID>WENV170345188
Genome IDCETE01222815
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 104
End posion on genome 178
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
gatagcattg
tRNA gene sequence
GGTGGATTAGTTTAACAGGCAAAACAGGGAACTCGTAATTCTCAAAAACCAGTTCAAGTC
TGGTATCCACCTCAA
Downstream region at tRNA end position
taagaggata
Secondary structure (Cloverleaf model)
>WENV170345188	Thr	CGT
                   g      TCAA taagaggata
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     T G G T C     A
      C A A        A      | | | | |     A
    A       T T T G       A C C A G     C
    G       | | | |                 T T
    G       A A A C
      C A          A     AAAA
                    G - C
                    G + T
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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