The detailed information of tRNA gene sequence


Sequence ID>WENV170345221
Genome IDCETE01234792
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 407
End posion on genome 330
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
aaattatatt
tRNA gene sequence
CGGGGTATAGCTTAGTCCGGTTAAAGCGCACGGCTGGGGGTCGTGAGAGCGGTAGTTCGA
ATCTACTTGCCCCGACTA
Downstream region at tRNA end position
ttaattttta
Secondary structure (Cloverleaf model)
>WENV170345221	Pro	GGG
                   t      ACTA ttaattttta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     T C A T C     A
    C T G A        A      + | | | |     G
  C         T T C G       G G T A G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     AGAGC
                    C - G
                    A - T
                    C - G
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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