The detailed information of tRNA gene sequence


Sequence ID>WENV170345592
Genome IDCETF01036632
Search identical group
Phylum/Class[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 639
End posion on genome 715
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatatataa
tRNA gene sequence 
GGGCCTATAGCTCAATTGGTTAGAGCGTCGGTCTCATAAACCGGTGGTTCCTGGTTCAAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aatttataaa
Secondary structure (Cloverleaf model)
>WENV170345592	Met	CAT
                   a      ACCA aatttataaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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