The detailed information of tRNA gene sequence


Sequence ID>WENV170345649
Genome IDCETF01047083
Search identical group
Phylum/Class[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 233
End posion on genome 309
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatataatat
tRNA gene sequence 
GGGCCTCTAGCTCAATAGGTTAGAGCATCCGGCTCATAACCGGCAGGTTCGCGGTTCAAA
TCCGCGGGGGCCCACCA
Downstream region at tRNA end position 
cagcttaaaa
Secondary structure (Cloverleaf model)
>WENV170345649	Met	CAT
                   t      ACCA cagcttaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T A
                    T     G C G C C     A
      T A A        A      | | | | |     A
    A       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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