The detailed information of tRNA gene sequence


Sequence ID>WENV170345693
Genome IDCETF01055427
Search identical group
Phylum/Class[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5163
End posion on genome 5088
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
ttgattaaat
tRNA gene sequence
GCCGCGTTCGTCTAGGGGTCCAGGACGCCGCCCTTTCACGGCGGTAGCACGGGTTCAAAT
CCCGTACGCGGTACAA
Downstream region at tRNA end position
tgttttgcat
Secondary structure (Cloverleaf model)
>WENV170345693	Glu	TTC
                   t      ACAA tgttttgcat
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C C A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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