The detailed information of tRNA gene sequence


Sequence ID>WENV170345719
Genome IDCETF01059105
Search identical group
Phylum/Class[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 355
End posion on genome 447
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggcaaaaat
tRNA gene sequence 
GGAGAGATGGGTGAGTTGGCTTAAACCACACGTTTGCTAAATGTGCGTAGGAAGAAATTT
CTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttagcactt
Secondary structure (Cloverleaf model)
>WENV170345719	Ser	GCT
                   t      GCCA gttagcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  C         A A C C
    T T A          A     CGTAGGAAGAAATTTCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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