The detailed information of tRNA gene sequence


Sequence ID>WENV170346925
Genome IDCETG01081199
Search identical group
Phylum/Class[CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 355
End posion on genome 444
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
aggctgttct
tRNA gene sequence
GGTGACGTGTCTGAGCGGCCTAAGGAGCACGATTGGAAGTCGTGTGTGCGTGCAAGCGCA
CCGTGGGTTCAAATCCCACCGTCACCGCCA
Downstream region at tRNA end position
ttgtcctgag
Secondary structure (Cloverleaf model)
>WENV170346925	Ser	GGA
                   t      GCCA ttgtcctgag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T C T       G T G G G     C
    G         + | |                 T T
    C       A G G A
      C T A        G     TGTGCGTGCAAGCGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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