The detailed information of tRNA gene sequence


Sequence ID>WENV170352565
Genome IDCETH01246548
Search identical group
Phylum/Class[CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 145
End posion on genome 232
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tgtagttcta
tRNA gene sequence
GGAGAGGTGTCTGAGTGGCTTAAGGTGCACGCTTGGAAAGCGTGTGTAGGTGAAAACCTA
CCGGGGGTTCAAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position
ataaaaaatg
Secondary structure (Cloverleaf model)
>WENV170352565	Ser	GGA
                   a      GCat ataaaaaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G T C T       G G G G G     C
    G         + |                   T T
    C       A G G T
      T T A        G     TGTAGGTGAAAACCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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