The detailed information of tRNA gene sequence


Sequence ID>WENV170355661
Genome IDCETI01320520
Search identical group
Phylum/Class[CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 263
End posion on genome 189
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position
tcgcagcctt
tRNA gene sequence
GCCGCGGTAGCTCAGGGGTAGAGCACGCCCTTGGTAAGGGCGGGGTCAGAGGTTCAATTC
CTCTTCGCGGCACCA
Downstream region at tRNA end position
tttaaaacct
Secondary structure (Cloverleaf model)
>WENV170355661	Thr	GGT
                   t      ACCA tttaaaacct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T          T T
                    T     T C T C C     A
        G A        A      | | | | |     A
      G     C T C G       A G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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