The detailed information of tRNA gene sequence


Sequence ID>WENV170355778
Genome IDCETI01399414
Search identical group
Phylum/Class[CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 264
End posion on genome 337
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tagtaaacta
tRNA gene sequence 
GAGAAAATAGTTCAAAAGGTAGAATAGTGGTTTGTCAAATCAAAAGTTACGAGTTCAAAT
CTCGTTTTTCTCGCtt
Downstream region at tRNA end position 
aatttctttt
Secondary structure (Cloverleaf model)
>WENV170355778	Asp	GTC
                   a      GCtt aatttctttt
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T A
                    T     T G C T C     A
      A A A        A      | | | | |     A
    A       C T T G       A C G A G     C
    G       | | | +                 T T
    G       G A A T
      T A          A     AAGTT
                    G   A
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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