The detailed information of tRNA gene sequence


Sequence ID>WENV170357439
Genome IDCETJ01187897
Search identical group
Phylum/Class[CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1849
End posion on genome 1773
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
gatttatagc
tRNA gene sequence
CGGAGTGTAGCTTAGCCTGGTAAAGCACTCGGCTGGGGGCCGAGAGATCGTTGGTTCAAA
TCCAATCACTCCGACCA
Downstream region at tRNA end position
tgtaatatta
Secondary structure (Cloverleaf model)
>WENV170357439	Pro	GGG
                   c      ACCA tgtaatatta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T A A C C     A
      C G A        A      + | | | |     A
    C       T T C G       G T T G G     C
    T       | | | |                 T T
    G       A A G C
      G T A        A     AGATC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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