The detailed information of tRNA gene sequence


Sequence ID>WENV170358348
Genome IDCETK01082497
Search identical group
Phylum/Class[CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 396
End posion on genome 485
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aactctaaat
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTTAAAGCGCACGCTTGGAAAGTGTGTGTACTTTTAAAGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
aaaatattga
Secondary structure (Cloverleaf model)
>WENV170358348	Ser	GGA
                   t      GCCA aaaatattga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGTACTTTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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