The detailed information of tRNA gene sequence


Sequence ID>WENV170359236
Genome IDCETK01285210
Search identical group
Phylum/Class[CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 414
End posion on genome 340
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttgcctaat
tRNA gene sequence 
GGGCCTCTAGCTCAATCGGTTAGAGCAGCCGACTCATAATCGGTTGGTTCCCGGTTCAAG
TCCGGGGAGGCCCACtc
Downstream region at tRNA end position 
tcacgatact
Secondary structure (Cloverleaf model)
>WENV170359236	Met	CAT
                   t      ACtc tcacgatact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G          T G
                    T     G G G C C     A
      T A A        A      | | | | |     A
    C       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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